CUSTOM BIOINFORMATICS SERVICES
Comprehensive Bioinformatics Solutions
From genomes to multi-omics integration, we provide end-to-end analysis pipelines tailored to your research goals.
Genomics
Targeted sequencing analysis
Whole genome sequencing analysis
Variant calling and annotation
SNP/indel identification and filtering
Structural variant detection
Genome assembly and quality assessment
Comparative genomics analysis
Population genetics studies
Transcriptomics
Bulk, single-cell, and spatial RNA-seq
Differential gene expression analysis
Gene set enrichment analysis (GSEA)
Pathway analysis and functional annotation (ORA)
scRNA-seq clustering and cell type identification
Spatial transcriptomics data processing
Alternative splicing analysis
Time-course expression profiling
Dose-response modeling
Epigenomics
ATAC-seq, CUT&RUN, and ChIP-seq
ChIP-seq peak calling and annotation
ATAC-seq accessibility analysis
CUT&RUN chromatin profiling
DNA methylation analysis
Histone modification mapping
Chromatin state segmentation
Regulatory element identification
Multi-omics
Integration across data types
Multi-modal data integration and visualization
Systems biology modeling
Biomarker discovery across data types
Network analysis and pathway integration
Custom pipeline development for complex datasets
Core Services
FULL BIOINFORMATIC ANALYSIS
End-to-end pipeline design, execution, and reporting for genomics, transcriptomics, and epigenomics datasets. Includes QC, alignment, quantification, downstream statistics, and visualization—whether for publications, regulatory submissions, or internal R&D.
PILOT ANALYSIS
Rapid, cost-effective analyses of newly generated sequencing data. We deliver QC summaries, exploratory results, and figures to assess feasibility, guide next experiments, or support early-stage pitches and grant applications.
DATA MINING AND GRANT SUPPORT
Leverage public repositories (GEO, ENCODE, TCGA, etc.) to uncover insights and strengthen your research or business case. We integrate existing datasets to generate supporting evidence for grants, investor decks, or product development.
CUSTOM PIPELINE DEVELOPMENT
Tailored workflow creation (Snakemake, Nextflow, or HPC-based pipelines) built for scalability and reproducibility. Designed for academic labs and startups needing robust pipelines that adapt to growing datasets and evolving project goals.
DATA VISUALIZATION AND REPORTING
Publication-quality plots, interactive dashboards, and clear summary reports that make complex results understandable—whether for manuscripts, presentations, stakeholders, or investors.
CONSULTATION AND TRAINING
One-on-one support, lab training sessions, or collaborative project design. We share best practices in data analysis, reproducibility, and HPC workflow management to accelerate both academic projects and biotech innovation.
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